Category Archives: Cardiac Electrophysiology

Cardiac Electrophysiology

Cite – U – Like — The revolution hits academia

Today, my heart skipped a beat. In seraching for other blogs on cardiac electrophysiology, I came upon a service called Cite-U-Like.

This is huge. HUGE. This is Del.icio.us for scientific papers. You can watch tags like, “electrophysiology” or “defibrillation.” You can watch authors. You can watch journals. You can add articles just by clicking a little “Add to Cite-U-Like” bookmarklet when you’re looking at the PubMed citation. It all has RSS feeds built in. You can import and export in EndNote and BibTeX formats. I imported our huge lab bibtex file, and the author/editor page is a who’s who of people that our lab has cited since… ever. Those we cite more are displayed in a larger font.

This is the human filter for the techno-literary deluge that is composed of all of the articles published every week in academic journals. In less than a year, I predict it will no longer be necessary to watch tables-of-contents as I do now with the major cardiac electrophysiology journals. It won’t be necessary to pore over so many abstracts, trying to figure out which papers to spend your valuable time reading. The community at large will do this collectively, resulting in less work for everyone. Those people most familiar with a particular lab, author, or subtopic will note the paper’s arrival, bookmark / read / tag it, and alert the rest of the world, or at least the part watching the subject on Cite-U-Like.

I’ve been wishing for something like this for a good six months or more. I can’t believe it already existed.

I’m planning on spending a significant portion of the rest of today figuring out how to use this thing to it’s ultimate ability. Well, what are you waiting for? Go tag your articles!

Working in the Rudy Lab

Hello from the lab of Dr.Yoram Rudy at Wash U. I’m using a spare desk they had available here. It’s nice to have a stationary, quasi-permanent place to work once more. I’ve been taking care of home GTD (Getting Things Done, for the uninitiated) stuff after breakfast and then heading in once I’m done with all of that. This usually has me here by 09:30 or 10:30 so far. I expect now that I’m on this routine I should get a bit better about that and typically be here by 09:00.

They’ve let me use this desktop machine that was at the desk, but it’s running (blech) Windows XP. Luckily, I was able to set up a VNC desktop on my server (brocktice.com) and I just switch it to fullscreen. I’m really glad I just upgraded the server a few weeks ago. This would have been painful the way it ran before.

The updates have been somewhat infrequent of late, so I’m renewing my focus on keeping you all posted about the fantastically interesting saga that is my life.

Ain’t got nothin’ but time

I’m still up at Larsmont, near Two Harbors, MN (check the ‘Posted from here’ link on the main page for the GPSed location). I’ve been trying to get work done, but without any kind of schedule, or even a framework of a schedule, and outside my normal environs, I’ve had a hard time getting work done.

I ended up trying to get work done all day, but being frequently distracted. This led to me trying to ‘catch up’ in the evenings, or whenever, and caused me to be tired, frustrated, and irritable.

After a discussion with Amanda over my sanity and productivity, I decided to start working a regular schedule. For the past three days, I’ve been working 08:00 – 12:00 and 13:00 – 17:00. This gives me a solid 8-hour work schedule and leaves time for some rest and relaxation in the evenings, as well as a nice, 1-hour lunch break.

This has helped increase my productivity, and more importantly, has done something to save my sanity. However, even within a scheduled work time, it’s easy to be distracted, to let breaks run a bit too long, and so on. In order to keep myself mindful of my time use, I’ve started using a program called KArm. It’s part of the KDE personal information management module, and fortunately runs on Mac OS X as well as various flavors of Linux, BSD, etc… With KArm, I’ve been logging time on a per-project basis, as well as break time, personal logistics (i.e. calling and cancelling my cable service since I don’t have an apartment), and work logistics (i.e. securing access to other labs’ computing resources). It turns out I take a lot of breaks. It’s nice to have it logged, so that I can watch the little minute counter rise as I slack off. I have about 20 minutes left of ‘work time’ today, but here’s where things stand right now (today’s time only):

Task Time
AscendingRamp 2 min
Break 2 hrs 1 min
MagfemVerification 1 hr 19 min
Personal Logistics 1 hr 44 min
Work Logistics 57 min
Regional Ischemia Paper 1 hr

The paper writing is tough. I’m making it a requirement that I do a minimum of 1 hour’s work on the paper every day. Otherwise, it’ll be avoided and procrastinated to oblivion. Note that break time outweighs all other items, with personal logistics coming in at a close second. I’m working on it.

The AscendingRamp time is misleading — I’ve probably spent close to 10 minutes on the project, but that’s mainly swinging over to the cluster at WLU and checking to make sure that the pacing simulation is chugging along. I started it yesterday, and it won’t be done till sometime around noonish tomorrow.

That’s all for now. Just in case you’re wondering, I’m classifying this time as ‘Personal Logistics.’